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researchnote bacteriology evaluation of different culture methods for of fungal peritonitis culture of capd uid helps in the diagnosis of peritonitis in patients on selecting an antimicrobial agent and to ...

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                     RESEARCHNOTE                                                                                                                BACTERIOLOGY
                   Evaluation of different culture methods for                                     of fungal peritonitis [1,2]. Culture of CAPD fluid helps in
                   the diagnosis of peritonitis in patients on                                     selecting an antimicrobial agent and to identify the source of
                   continuous ambulatory peritoneal dialysis                                       infection [1]. Various culture methods have been employed to
                                                                                                   increase the sensitivity of culture by inoculating the centrifuged
                                                                                                   deposit of fluid in different culture media and inoculating the
                               1                2            3                    3                fluid in blood culture bottles [3–5].
                   R. N. Iyer , A. K. Reddy , S. Gande and A. Aiyangar
                   1) Department of Microbiology, Global Hospitals, 2) Department of                  Among the different culture methods, inoculation of blood
                   Microbiology, GHR Micro Diagnostics and 3) Department of Nephrology,            culture bottles with the fluid was observed in the past to
                   Global Hospitals, Hyderabad, India                                              enhance the yield of organisms [3–5]. The presence of
                                                                                                   organisms sequestered within phagocytes such as polymorphs
                                                                                                   precludes the isolation of organisms and could be a reason for
                                                                                                   false-negative results, despite the use of automated blood
                                                                                                   culture systems [6]. Water lysis, incorporation of Tween 80 in
                   Abstract                                                                        blood agar and treatment of specimens with Triton-X anionic
                                                                                                   surface active agents have been described as options for
                   A total of 170 continuous ambulatory peritoneal dialysis (CAPD)                 increasing the yield of clinically significant organisms, by
                   fluids were processed by various culture methods, including direct               disrupting phagocytes and subsequent release of intracellular
                   inoculation of the centrifuged sediment, inoculation into auto-                 organisms [6]. However, all methods have been tried in
                   mated blood culture bottles, water lysis, Tween-80 incorporated                 isolation  and a combination of methods has not been
                   blood agar, and Triton-X treatment of the specimen. Of 170                      attempted. The aim of this study was to evaluate the
                   CAPDfluids,127showedthegrowthofbacteria/fungi. Sixty-three                       performance of different culture methods for the diagnosis
                   fluids showed growth by all methods, the water lysis alone                       of peritonitis in patients on CAPD.
                   detected 24 additional positive cultures, while Tween-80 blood                     A total of 170 CAPD effluent bags received between
                   agar and Triton-X yielded 30 additional positive cultures. A                    January 2009 and September 2010 were included in the study.
                   combination of water lysis, Tween-80 blood agar and Triton-X                    All effluent bags were transported to the Department of
                   treatment of the CAPD fluid is recommended for diagnosis of                      Microbiology within 30 min of dialysis and all bags were
                   CAPD peritonitis in resource-limited settings.                                  inspected for obvious leaks on receipt at the laboratory.
                                                                                                   Around 100 mL of fluid was aspirated from the injection port
                   Keywords: BACTEC, CAPD, Triton-X, Tween-80, water lysis                         of the CAPD bag under all aseptic precautions. Ten mL of the
                   Original Submission: 14 June 2013; Revised Submission:                          aspirated fluid was inoculated into the BACTEC Aerobic F
                   22 August 2013; Accepted: 16 September 2013                                     bottles and the BACTEC Mycoses bottles and incubated in the
                   Editor: D. Raoult                                                               BACTEC 9120 (BD & Co, Sparks, MD, USA) for 7 days. The
                   Article published online: 11 November 2013                                      remaining fluid was distributed aseptically into 15-mL sterile
                   Clin Microbiol Infect 2014; 20: O294–O296                                       centrifuge tubes and was processed as per the following
                   10.1111/1469-0691.12402                                                         protocol. Tubes were centrifuged at 134.1 g for 10 min, the
                                                                                                   supernatant was discarded and the sediments were pooled and
                                                                                                   recentrifuged at the same speed for 10 min before final
                     Correspondingauthor:DrRanganathanNIyer,ConsultantClinical                     sediment was obtained. Loopfuls of the sediment were
                     Microbiologist, Global Hospitals, Lakdi- ka- pool, Hyderabad 50004,           inoculated into sheep blood agar (5% sheep blood), chocolate
                     India
                     E-mail: ranganathaniyer@yahoo.com                                             agar, Tween-80 incorporated blood agar, brain heart infusion
                                                                                                   agar and Sabourauds dextrose agar.
                                                                                                      The procedure for water lysis includes 50 mL of the fluid in
                   Peritonitis is a common complication in patients with end-                      two centrifuge tubes, which were centrifuged at 134.1 g for
                   stage renal disease on continuous ambulatory peritoneal                         10 min and the supernatant discarded. The sediment was
                   dialysis (CAPD), contributing to 16% of deaths in these                         resuspended in 10 mL of sterile distilled water with vigorous
                   patients [1]. Episodes of peritonitis are best managed with the                 shaking for 15 min. This was recentrifuged and the deposit was
                   help of good clinical microbiology laboratory support with                      suspended. This was inoculated into blood and chocolate agar
                   direct microscopy and culture of CAPD fluids. Whilst direct                      [7]. Fifteen mL of fluid in a centrifuge tube was used for the
                   microscopy has a limited role in the diagnosis of bacterial                     Triton-X treatment [6]. Two or three drops of Triton-X
                   peritonitis, it is useful for a prompt diagnosis and management                 (Sigma reagent grade) was added to 15 mL fluid and allowed to
                   ª2013 The Authors
                   Clinical Microbiology and Infection ª2013 European Society of Clinical Microbiology and Infectious Diseases
                     CMI                                                                                                                                  Research Note           O295
                     stand with intermittent shaking at 37°C for 15 min. This was                          TABLE 2. Organisms isolated from the CAPD cultures
                     inoculated into blood and chocolate agar. Blood agar                                  (n = 127)
                     containing Tween-80 was prepared by adding 2% Tween-80                                  Organisms isolated                                               No. (%)
                     to the Columbia blood agar base and the mixture was
                     autoclaved at 121°C for 15 min, at a pressure of 15 pounds                              Staphylococcus aureus                                            34 (26.7)
                                                                                                             Enterococcus faecalis                                            23 (18.1)
                     per square inch. Sheep blood (5%) was added after the basal                             E. coli                                                          19 (14.9)
                                                                                                             Klebsiella pneumoniae                                             12 (9.4)
                     medium cooled to 45°C and the medium poured. Loopfuls of                                Enterobacter cloacae                                               7 (5.5)
                                                                                                             Citrobacter freundii                                               1 (0.78)
                     the centrifuged deposit were inoculated and all plates were                             Pseudomonas aeruginosa                                             8 (6.29)
                                                                                                             Acinetobacter baumanii calcoaceticus complex                       7 (5.5)
                     incubated aerobically at 37°C with added 5–6% CO2 for 48 h                              Serratia marcescens                                                1 (0.78)
                                                                                                             Candida albicans                                                   4 (3.14)
                     [8]. The inoculated fungal culture media were incubated at 35°                          Candida parapsilosis                                               6 (4.7)
                     Cfor 24 h and then at 28–30°C for another 3 weeks before                                Candida tropicalis                                                 2 (1.57)
                     being discarded. All plates were inspected at 24-h intervals for
                     growth of organisms. The remaining sediment after the direct
                     centrifugation of the fluid was used for the direct microscopic                           The low culture positivity in patients with peritonitis on
                     examination, which included gram stain and other special                              CAPDhasbeenattributed to the low load of the organisms in
                     stains. The statistical significance was calculated.                                   the majority of the patients, the presence of an antimicrobial
                        Of 170 CAPD fluids, 127 showed the growth of bacteria,                              agent in the peritoneal fluid of the patient receiving antimi-
                     which were identified using standard biochemical reactions,                            crobial therapy, the presence of intracellular organisms,
                     and yeast isolates, using a combination of germ tube, assim-                          peritonitis caused by endotoxin released by bacterial infection
                     ilation reactions and morphology on corn meal agar. The                               and the culture technique used for the isolation of the
                     culture positivity identified using different culture methods is                       organism [9]. Different investigators have used several meth-
                     shown in Table 1. Of 127 culture-positive fluids, 63 showed                            ods to enhance the yield of organisms from the CAPD effluent,
                     growth using the conventional centrifugation culture method                           including the use of mass spectroscopy and sequencing and
                     and all these fluids also showed growth when using the                                 MALDI-TOF [3–11]. In the present study, we have observed
                     remaining four methods. Inoculation of fluids into BACTEC                              high culture positivity with water lysis specimens and speci-
                     bottles detected growth in an additional 10 patients compared                         mens pretreated with Triton-X and Tween-80 incorporated
                     with the conventional culture method. Incorporation of                                blood agar when compared with the automated blood culture
                     Tween-80 and Triton-X treatment resulted in culture positiv-                          system and direct inoculation of the centrifuged deposit of the
                     ity in 30 additional fluids. There was no difference in the                            specimen into different culture media. This was also shown to
                     culture positivity rate between the Triton-X and Tween 80                             be statistically significant. The high culture positivity of the
                     methods. The water lysis method detected 24 additional                                above methods is due to the release of intracellular organisms
                     positive cultures and all these showed no growth by Triton-X/                         present in phagocytes by prior treatment of the specimen with
                     Tween-80. The 30 fluids that showed growth using the                                   chemical and physical methods. However, there are concerns
                     Tween-80 and Triton-X methods showed no growth when                                   that manipulation of specimens prior to inoculation may result
                     using the water lysis method. The fluids that showed growth                            in contamination and this can be overcome by following
                     using the BACTEC method also showed growth when using                                 standard microbiology precautions.
                     the Triton X/Tween 80 incorporated blood agar and water                                  Several studies have shown that culture rates increased
                     lysis method. The organisms isolated are shown in Table 2.                            significantly with the BACTEC blood culture system compared
                                                                                                           with conventional culture systems [3,5,9,12]. In our study, we
                                                                                                           also found that the BACTEC blood culture system increased
                     TABLE 1. Culture positivity by different culture methods                              the culture positivity (73/127) compared with direct inocula-
                     (n = 127)                                                                             tion of the centrifuged deposit of fluid into different culture
                                                                    No. of positive cultures (%),          media (63/127). Although the BACTEC method allows the
                       Culture method                               p value
                                                                                                           rapid detection of pathogens, it requires expensive equipment
                       Direct culture from the sediment              63 (49.6)                             and blood culture bottles. A cost analysis of the different
                       BACTEC blood culture bottle inoculation       73 (57.4)
                       Tween 80 blood agar                           93 (73.2), <0.0001                    methods revealed the water analysis and the use of Tween 80
                       Triton X-treated specimens                    93 (73.2), <0.0001
                       Water lysis                                   87 (68.5), <0.001                     blood agar and Triton X (at Rs 250/- and Rs 50/-, respectively)
                       Combination of Triton X/Tween 80 and         117 (92.1), <0.0001
                        water lysis                                                                        to be less expensive compared with inoculating blood culture
                                                                                                           bottles (Rs 500/-).
                                                                                                                                                                      ª2013 The Authors
                                                                Clinical Microbiology and Infection ª2013 European Society of Clinical Microbiology and Infectious Diseases, CMI, 20, O294–O296
                  O296      Clinical Microbiology and Infection, Volume 20 Number 5, May 2014                                                         CMI
                    We have retrospectively reviewed the white blood cell                 2. Predari SC, De Paulis AN, Veron D, Zucchini A, Santoianni JE. Fungal
                  (WBC)countsofthe 170 fluids received for culture and found                  peritonitis in patients on peritoneal dialysis: twenty five years of
                                                           –1                                experience a teaching hospital in Argentina. Rev Argent Microbiol 2007;
                  that WBC count was less than 100 lL         and polymorphonu-              39: 213–217.
                  clear leukocyte counts were less than 50% in 30/43 culture-             3. Yoon SH, Choi NW, Yun SR. Detecting bacterial growth in continuous
                  negative patients. This explains the low culture positivity (127/          ambulatory peritoneal dialysis effluent using two culture methods.
                  70) of CAPD fluids in our study compared with other studies                 Korean J Intern Med 2010; 25: 82–85.
                                                                                          4. Rayner BL, Williams DS, Oliver S. Inoculation of peritoneal dialysate
                  in spite of using different culture methods [3,5,7,8]. Based on            fluid into blood culture bottles improves culture rates. S Afr Med J
                  our results, we recommend the use of inoculation of the                    1993; 83: 42–43.
                  centrifuged deposit into different culture media and pretreat-          5. Males BM, Walshe JJ, Garringer L, Koscinski D, Amsterdam D. Addi-
                                                                                             Chek filtration, BACTEC, and 10-ml culture methods for recovery of
                  ment of the fluid with Triton-X, water lysis and inoculation                microorganisms from dialysis effluent during episodes of peritonitis. J
                  into Tween-80 incorporated blood agar as a means of                        Clin Microbiol 1986; 23: 350–353.
                  enhancing the yield of organisms in CAPD peritonitis in                 6. Taylor PC, Warren LAP, Grundy RE. Increased microbial yield from
                                                                                             continuous ambulatory peritoneal dialysis peritonitis effluent after
                  resource-limited settings.                                                 chemical or physical disruption of phagocytes. J Clin Microbiol 1987; 25:
                                                                                             583–585.
                                                                                          7. Marshall RJ. A simple lysis method for the culture of dialysis fluid from
                  Acknowledgements                                                           patients on continuous ambulatory dialysis. J Hosp Infect 1992; 20: 59–
                                                                                             60.
                                                                                          8. Gould IM, Reeves I, Chauhan N. Novel plate culture to improve the
                  MrM.Surender Reddy for technical help and collecting data in               microbiological diagnosis of peritonitis in patients with continuous
                  the department.                                                            peritoneal dialysis. J Clin Microbiol 1988; 26: 1687–1690.
                                                                                          9. Alfa MJ, Degagne P, Holson N, Harding GK. Improved detection of
                                                                                             bacterial growth in continuous ambulatory peritoneal dialysis effluent
                                                                                             by use of BacT/AlerT Fan bottles. J Clin Microbiol 1997; 35: 862–866.
                  Transparencey Declaration                                              10. Lagier JC, Armougom F, Million M et al. Microbial culturomics:
                                                                                             paradigm shift in the human gut microbiome study. Clin Microbiol Infect
                                                                                             2012; 18: 1185–1193.
                  The authors declare no conflicts of interest.                           11. Seng P, Abat C, Rolain JM et al. Identification of rare pathogenic
                                                                                             bacteria in a clinical microbiology laboratory: impact of matrix assisted
                                                                                             laser desorption ionization-time of flight mass spectrometry. J Clin
                  References                                                                 Microbiol 2013; 51: 2182–2194.
                                                                                         12. Singh N, Rihs JD, Gaywoski T, Mieles L, Yv VL. Improved detection of
                                                                                             spontaneous bacterial peritonitis with bactec as compared with
                   1. Tao Li PK, Szeto CC, Piraino B et al. Peritoneal dialysis related      conventional culture methods: a prospective study. Diagn Microbial
                     infections recommendations. Perit Dial Int 2010; 30: 393–423.           Infect Dis 1994; 19: 1–4.
                  ª2013 The Authors
                  Clinical Microbiology and Infection ª2013 European Society of Clinical Microbiology and Infectious Diseases, CMI, 20, O294–O296
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...Researchnote bacteriology evaluation of different culture methods for fungal peritonitis capd uid helps in the diagnosis patients on selecting an antimicrobial agent and to identify source continuous ambulatory peritoneal dialysis infection various have been employed increase sensitivity by inoculating centrifuged deposit media blood bottles r n iyer a k reddy s gande aiyangar department microbiology global hospitals among inoculation ghr micro diagnostics nephrology with was observed past hyderabad india enhance yield organisms presence sequestered within phagocytes such as polymorphs precludes isolation could be reason false negative results despite use automated systems water lysis incorporation tween abstract agar treatment specimens triton x anionic surface active agents described options total increasing clinically signicant uids were processed including direct disrupting subsequent release intracellular sediment into auto however all tried mated incorporated combination has not ...

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